miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|83820200|gb|CX268423.1|CX268423 GAGCGAGCTCTGGTAACGCTCATCGAGAAGGGCGTCGCCTTCGAGACCGTCCCCGTCGATCTCATGAAAGGAGAACACAA
GCAGCCTGCTTATCTCGCCTTACAGCCTTTCGGTACCGTCCCTGCTGTTGTCGACGGCGACTACAAAATCTTTGAGTCAC
GTGCCGTCATGAGGTACGTAGCTGAGAAGTACAGGTCACAAGGACCTGACCTTTTGGGGAAAGCCGTGGAAGAAAGAGGT
CAAGTTGAGCAATGGCTAGACGTGGAGGCGACCACTTACCACCCACCGCTACTTAACCTGACACTTCACATAATGTTCGC
GTCAGTTATGGGATTCCCATCTGATGAGAAGCTGATCAAGGAGAGCGAAGAGAAGCTCTCGGCTGTTCTCGATGTCTACG
AGGCACATCTCTCAAAGAGCAAGTACTTGGCCGGTGATTTCGTGAGCTTGGCTGACTTGGCTCACCTCCCGTTCACTGAT
TACTTGGTGGGTCCGATCGGGAAGGCTTACATGATCAAAGATAGGAAGCACGTGAGCGCGTGGTGGGACAGTATTAGCAG
CCGTCCTGCGTGGAAGGAGACTCTTGAGAAGTATTCATTCCCGGCTTAAGAACATGATGTTCTTTGTTGTTGTTGTTTGT
GTGTTTATGTGAGGTTTAATAATAATGTGGCAATGTATGCTTCTTCTTATATTATGTTACCTCTACTCTGTTTCG




Most similar to sp|P42761|GSTF3_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P42761|GSTF3_ARATH Glutathione S-transferase ERD13
           OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3
          Length = 215

 Score =  319 bits (817), Expect = 1e-86
 Identities = 152/201 (75%), Positives = 173/201 (86%)
 Frame = +1

Query: 1   ERALVTLIEKGVAFETVPVDLMKGEHKQPAYLALQPFGTVPAVVDGDYKIFESRAVMRYV 180
           +RA+VTL+EKGV+FETV VDLMKGE +QP YLA+QPFG +P +VDGDYKIFESRA+MRY+
Sbjct: 14  KRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYI 73

Query: 181 AEKYRSQGPDLLGKAVEERGQVEQWLDVEATTYHPPLLNLTLHIMFASVMGFPSDXXXXX 360
           AEKYRSQGPDLLGK +EERGQVEQWLDVEAT+YHPPLL LTL+I+FA +MGFP+D     
Sbjct: 74  AEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIK 133

Query: 361 XXXXXXXAVLDVYEAHLSKSKYLAGDFVSLADLAHLPFTDYLVGPIGKAYMIKDRKHVSA 540
                   VLDVYEA LSK++YLAGDFVSLADLAHLPFT+YLVGPIGKA++IKDRKHVSA
Sbjct: 134 ESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSA 193

Query: 541 WWDSISSRPAWKETLEKYSFP 603
           WWD ISSR AWKE   KYS P
Sbjct: 194 WWDKISSRAAWKEVSAKYSLP 214